1 General statistics

1.1 Isolate summary table

Genome quality is defined by Bowers R., et. al., Nat Biotechnol, 2017.

High quality is defined as genomes with completeness > 90%, contamination < 5%, presence of the 28S, 18S, and 5S rRNA genes and at least 18 tRNAs.

Medium quality is defined as genomes with completeness >= 50%, contamination < 10%.

Low quality is defined as genomes with completeness < 50%, contamination < 10%.

Contaminated is defined as genomes with contamination >= 10%.

1.2 Reads quality plot

1.3 Completeness, Contamination

1.4 Taxonomy plot

1.5 Isolate table